STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUCA1Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. (468 aa)    
Predicted Functional Partners:
FUCA2
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
  
 
0.912
GLB1
Beta-galactosidase.
 
 
 0.715
LOC101370012
Protein tyrosine phosphatase type IVA 1-like isoform X1.
      
 0.601
PTP4A1
Protein tyrosine phosphatase type IVA 1.
      
 0.601
MANBA
Beta-mannosidase.
     
 0.554
GLA
Alpha-galactosidase.
   
  
 0.537
LOC101371796
Cytosolic beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
 0.533
MAN2B1
Alpha-mannosidase.
    
 
 0.532
PHLDA3
Pleckstrin homology-like domain family A member 3.
      
 0.524
MAN1A1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.521
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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