STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM50ATransmembrane protein 50A isoform X1. (157 aa)    
Predicted Functional Partners:
LEPROTL1
Leptin receptor overlapping transcript-like 1.
   
 
 0.901
LEPROT
Leptin receptor gene-related protein isoform X1.
   
 
 0.901
RSRP1
Arginine/serine-rich protein 1.
      
 0.723
MTPAP
poly(A) RNA polymerase, mitochondrial.
   
  
 0.631
RHCE
Blood group Rh(CE) polypeptide isoform X1; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
      
 0.526
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.454
ABCB7
ATP-binding cassette sub-family B member 7, mitochondrial isoform X1.
 
    
 0.452
OTOF
Otoferlin isoform X1.
      
 0.450
TMEM57
LOW QUALITY PROTEIN: macoilin.
 
    
 0.448
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.