STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALNT5Polypeptide N-acetylgalactosaminyltransferase. (936 aa)    
Predicted Functional Partners:
ST6GALNAC1
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 isoform X1; Belongs to the glycosyltransferase 29 family.
     
 0.955
B3GNT6
Hexosyltransferase.
     
 0.942
GCNT1
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase.
     
 0.936
C1GALT1
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
   
 
 0.860
SEC23IP
SEC23-interacting protein isoform X1.
      
 0.759
COPB1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
      
 0.724
ST3GAL5
Lactosylceramide alpha-2,3-sialyltransferase; Belongs to the glycosyltransferase 29 family.
      
 0.702
C1GALT1C1
C1GALT1-specific chaperone 1.
     
 0.694
C1GALT1C1L
LOW QUALITY PROTEIN: C1GALT1-specific chaperone 1-like.
     
 0.694
SEC24A
Protein transport protein Sec24A.
      
 0.651
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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