STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYDGFLOW QUALITY PROTEIN: myeloid-derived growth factor. (276 aa)    
Predicted Functional Partners:
COPE
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
  
 0.765
SSR4
Translocon-associated protein subunit delta isoform X1.
   
  
 0.623
CALR
Calreticulin.
   
   0.554
SLC35B1
Solute carrier family 35 member B1 isoform X1.
   
    0.547
SDF2L1
Stromal cell-derived factor 2-like protein 1.
   
  
 0.525
P4HB
Protein disulfide-isomerase.
   
  
 0.515
CRELD2
Cysteine-rich with EGF-like domain protein 2.
   
  
 0.497
SMIM7
Small integral membrane protein 7.
   
  
 0.474
UFL1
E3 UFM1-protein ligase 1.
      
 0.451
SPATA5L1
Spermatogenesis-associated protein 5-like protein 1.
      
 0.451
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (18%) [HD]