STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM106BTransmembrane protein 106B. (275 aa)    
Predicted Functional Partners:
LOC101368415
Protein C9orf72 homolog.
      
 0.759
LAMP1
Lysosome-associated membrane glycoprotein 1 isoform X1.
    
 
 0.724
PPT1
Palmitoyl-protein thioesterase 1 isoform X1.
      
 0.720
CTSD
Cathepsin D isoform X1; Belongs to the peptidase A1 family.
    
 
 0.710
PSAP
Prosaposin isoform X1.
      
 0.701
SCIN
Adseverin.
 
   
 0.626
GRN
Granulins isoform X2.
      
 0.619
SPPL2B
Signal peptide peptidase-like 2B.
      
 0.611
TRPM2
Transient receptor potential cation channel subfamily M member 2.
      
 0.586
CHMP2B
Charged multivesicular body protein 2b isoform X1.
   
 
 0.556
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.