STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCC1EF-hand and coiled-coil domain-containing protein 1. (605 aa)    
Predicted Functional Partners:
PET100
Protein PET100 homolog, mitochondrial isoform X1.
      
 0.722
ACBD5
LOW QUALITY PROTEIN: acyl-CoA-binding domain-containing protein 5.
   
    0.690
LOC101384224
acyl-CoA-binding domain-containing protein 5-like.
   
    0.690
POLR2K
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
      
 0.620
LOC101386077
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
      
 0.565
RPA3
Replication protein A 14 kDa subunit.
      
 0.525
APH1B
Gamma-secretase subunit APH-1B isoform X1.
      
 0.525
ACBD4
acyl-CoA-binding domain-containing protein 4.
   
    0.483
JMJD8
jmjC domain-containing protein 8.
      
 0.450
ACBD6
acyl-CoA-binding domain-containing protein 6.
   
    0.424
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.