STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PODXL2Podocalyxin-like protein 2. (605 aa)    
Predicted Functional Partners:
TPST1
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
    
  0.833
TPST2
Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family.
    
  0.790
DUS2
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1.
      
 0.701
SORL1
Sortilin-related receptor.
    
 0.666
MAP6D1
MAP6 domain-containing protein 1.
    
 0.660
COPRS
Coordinator of PRMT5 and differentiation stimulator isoform X2.
      
 0.620
PAXBP1
PAX3- and PAX7-binding protein 1.
      
 0.620
COMTD1
Catechol O-methyltransferase domain-containing protein 1.
   
  
 0.618
TMC4
Transmembrane channel-like protein.
   
  
 0.615
APOE
Apolipoprotein E.
  
 
 0.611
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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