STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM192AProtein FAM192A. (254 aa)    
Predicted Functional Partners:
GSC
Homeobox protein goosecoid.
    
   0.897
PSME3
Proteasome activator complex subunit 3 isoform X1.
    
 
 0.755
CACTIN
Cactin.
    
 
 0.734
XAB2
pre-mRNA-splicing factor SYF1.
    
   0.729
CDC5L
Cell division cycle 5-like protein isoform X1.
    
   0.729
PRPF8
pre-mRNA-processing-splicing factor 8.
    
   0.729
TTC33
Tetratricopeptide repeat protein 33.
      
 0.721
FAM32A
Protein FAM32A.
    
 
 0.570
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
   0.566
PRKRIP1
PRKR-interacting protein 1.
    
 
 0.564
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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