STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDS5ASister chromatid cohesion protein PDS5 homolog A isoform X1. (1337 aa)    
Predicted Functional Partners:
WAPAL
Wings apart-like protein homolog isoform X1.
   
 0.978
SMC3
Structural maintenance of chromosomes protein.
   
 0.970
NIPBL
Nipped-B protein.
   
 0.956
SMC1A
Structural maintenance of chromosomes protein.
   
 0.955
STAG2
Cohesin subunit SA-2.
   
 0.947
CDCA5
Sororin.
    
 0.907
STAG1
Cohesin subunit SA-1 isoform X1.
   
 0.899
SMC1B
Structural maintenance of chromosomes protein.
   
 0.896
ESCO2
N-acetyltransferase ESCO2.
   
 0.865
MAU2
MAU2 chromatid cohesion factor homolog.
   
 
 0.863
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.