STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJA1E3 ubiquitin-protein ligase Praja-1 isoform X1. (641 aa)    
Predicted Functional Partners:
LOC101384406
Melanoma-associated antigen D1 isoform X1.
   
 
 0.787
RNF11
RING finger protein 11.
   
    0.772
PAQR5
Membrane progestin receptor gamma.
    
 
 0.726
GINM1
Glycoprotein integral membrane protein 1 isoform X1.
    
 
 0.724
LOC101384702
Uncharacterized protein CXorf38 homolog.
      
 0.723
UBE2G1
Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.686
S100A14
Protein S100-A14; Belongs to the S-100 family.
      
 0.676
S100A5
Protein S100-A5.
      
 0.675
LCTL
Lactase-like protein; Belongs to the glycosyl hydrolase 1 family.
      
 0.664
MID1IP1
Mid1-interacting protein 1.
      
 0.636
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.