STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACRCAcidic repeat-containing protein. (457 aa)    
Predicted Functional Partners:
TAF1D
TATA box-binding protein-associated factor RNA polymerase I subunit D.
    
 0.822
SPRTN
sprT-like domain-containing protein Spartan.
   
  
 0.637
RRN3
RNA polymerase I-specific transcription initiation factor RRN3 isoform X1.
    
 0.630
TBPL1
TATA box-binding protein-like protein 1.
    
 0.627
TBPL2
TATA box-binding protein-like protein 2.
    
 0.627
LOC101386440
UPF0722 protein C11orf88 homolog.
    
 0.627
TBP
TATA-box-binding protein.
    
 0.627
POLR1A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.602
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.581
POLR1E
DNA-directed RNA polymerase I subunit RPA49 isoform X1.
     
 0.574
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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