STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CABP1Calcium-binding protein 1 isoform X1. (368 aa)    
Predicted Functional Partners:
ARL3
ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.
   
 0.748
CIB1
Calcium and integrin-binding protein 1.
      
 0.717
DNAJC12
dnaJ homolog subfamily C member 12.
      
 0.706
NPHP3
Nephrocystin-3.
    
 0.642
CASK
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.636
ECM2
Extracellular matrix protein 2 isoform X1.
    
 0.556
HSPB3
Heat shock protein beta-3; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.542
LOC101385115
ETS translocation variant 3-like protein.
      
 0.522
ING2
Inhibitor of growth protein.
      
 0.522
ERF
ETS domain-containing transcription factor ERF isoform X1.
      
 0.522
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.