STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLGALT2Procollagen galactosyltransferase 2. (626 aa)    
Predicted Functional Partners:
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
0.956
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
0.953
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
0.952
COLGALT1
Procollagen galactosyltransferase 1.
  
  
 
0.901
COL5A2
Collagen alpha-2(V) chain.
    
 0.621
COL16A1
Collagen alpha-1(XVI) chain.
   
 0.567
COL4A6
Collagen alpha-6(IV) chain.
    
 0.556
CHST10
Carbohydrate sulfotransferase.
      
 0.523
NSMAF
Protein FAN.
      
 0.522
CRTAP
Cartilage-associated protein.
      
 0.522
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.