STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBLupus La protein. (145 aa)    
Predicted Functional Partners:
LOC101368041
Lupus La protein homolog.
 
      0.900
METAP2
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.
   
    0.711
LOC101373032
Heterogeneous nuclear ribonucleoproteins A2/B1-like isoform X1.
   
 
 0.692
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 
 0.692
ZC3H15
Zinc finger CCCH domain-containing protein 15 isoform X1.
   
    0.613
DNAJC2
dnaJ homolog subfamily C member 2 isoform X1.
   
    0.608
CCT8
T-complex protein 1 subunit theta isoform X1.
   
  
 0.604
HNRNPC
Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1.
   
 
 0.601
NAA15
N-alpha-acetyltransferase 15, NatA auxiliary subunit isoform X1.
   
    0.592
SRSF3
Serine/arginine-rich splicing factor 3 isoform X1.
   
  
 0.584
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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