STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IER5Immediate early response gene 5 protein. (321 aa)    
Predicted Functional Partners:
CDT1
DNA replication factor Cdt1.
      
 0.521
RIPK4
Receptor-interacting serine/threonine-protein kinase 4.
    
 
 0.456
STX6
Syntaxin-6; Belongs to the syntaxin family.
      
 0.450
STX10
Syntaxin-10 isoform X1.
      
 0.450
COL6A3
Collagen alpha-3(VI) chain.
      
 0.449
LCMT2
tRNA wybutosine-synthesizing protein 4.
      
 0.449
VWA2
Von Willebrand factor A domain-containing protein 2.
      
 0.449
RHOV
Rho-related GTP-binding protein RhoV.
      
 0.441
PHLDA3
Pleckstrin homology-like domain family A member 3.
      
 0.439
PPP2R2C
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
   0.431
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.