STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTA1Vacuolar protein sorting-associated protein VTA1 homolog isoform X1. (306 aa)    
Predicted Functional Partners:
VPS4A
Vacuolar protein sorting-associated protein 4A isoform X1; Belongs to the AAA ATPase family.
   
 0.999
VPS4B
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
   
 0.999
CHMP5
Charged multivesicular body protein 5.
   
 0.998
CHMP1A
Charged multivesicular body protein 1a.
    
 0.990
CHMP1B
Charged multivesicular body protein 1b.
    
 0.986
GCH1
GTP cyclohydrolase 1 isoform X1.
   
   0.905
BCAS2
pre-mRNA-splicing factor SPF27.
   
   0.901
LOC101364243
IST1 homolog.
   
 
 0.893
LOC101379379
LOW QUALITY PROTEIN: IST1 homolog.
   
 
 0.893
CHMP4C
Charged multivesicular body protein 4c.
    
 0.859
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.