STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCNKAChloride channel protein. (686 aa)    
Predicted Functional Partners:
BSND
Barttin.
   
 
 0.961
OSTM1
Osteopetrosis-associated transmembrane protein 1.
   
 0.647
KCNH8
Potassium voltage-gated channel subfamily H member 8.
   
  
 0.590
LOC101376401
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
   
  
 0.542
PRODH2
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
   
  
 0.539
BTNL10
Butyrophilin-like protein 10.
      
 0.531
CLIC1
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.523
MUC1
Mucin-1.
   
 
 0.463
CNGA1
cGMP-gated cation channel alpha-1.
    
 
 0.462
SCNN1G
Amiloride-sensitive sodium channel subunit gamma; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
   
  
 0.458
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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