STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF186LOW QUALITY PROTEIN: RING finger protein 186. (346 aa)    
Predicted Functional Partners:
SVOPL
Putative transporter SVOPL.
      
 0.705
OTUD3
OTU domain-containing protein 3.
    
 
 0.703
LOC101371862
Phospholipase A(2).
      
 0.684
CARD9
Caspase recruitment domain-containing protein 9.
   
 
 0.626
BTNL2
Butyrophilin-like protein 2.
    
 
 0.620
PUS10
Putative tRNA pseudouridine synthase Pus10 isoform X1.
      
 0.615
UBE2H
Ubiquitin-conjugating enzyme E2 H isoform X1; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.554
PSMG1
Proteasome assembly chaperone 1; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg2.
   
  
 0.533
RNF182
E3 ubiquitin-protein ligase RNF182.
      
 0.529
KBTBD3
Kelch repeat and BTB domain-containing protein 3.
    
 
 0.527
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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