STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPHD1Aspartate beta-hydroxylase domain-containing protein 1. (367 aa)    
Predicted Functional Partners:
SEZ6L2
Seizure 6-like protein 2 isoform X1.
 
 
  
 0.817
KCTD13
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1.
      
 0.817
LOC101367232
Transmembrane protein C16orf54 homolog.
      
 0.809
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.695
YPEL3
Protein yippee-like; Belongs to the yippee family.
      
 0.609
PDZD9
PDZ domain-containing protein 9.
      
 0.566
DOC2A
Double C2-like domain-containing protein.
   
  
 0.535
KCTD7
BTB/POZ domain-containing protein KCTD7 isoform X1.
      
 0.535
LOC101384490
Uncharacterized protein C16orf92 homolog.
      
 0.532
FAM57B
Protein FAM57B.
      
 0.529
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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