STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXA13Homeobox protein Hox-A13. (303 aa)    
Predicted Functional Partners:
GLCCI1
Glucocorticoid-induced transcript 1 protein.
      
 0.525
SALL3
Sal-like protein 3.
   
 
 0.487
HOXA10
Homeobox protein Hox-A10.
   
  
0.438
PIK3IP1
Phosphoinositide-3-kinase-interacting protein 1 isoform X1.
      
 0.436
NUP188
Nucleoporin NUP188 homolog.
      
 0.407
FJX1
Four-jointed box protein 1.
      
 0.402
PBX3
pre-B-cell leukemia transcription factor 3 isoform X1.
    
 
 0.401
PBX1
pre-B-cell leukemia transcription factor 1 isoform X1.
    
 
 0.401
PBX4
pre-B-cell leukemia transcription factor 4.
    
 
 0.401
PBX2
pre-B-cell leukemia transcription factor 2.
    
 
 0.401
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.