STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUBE1Signal peptide, CUB and EGF-like domain-containing protein 1. (987 aa)    
Predicted Functional Partners:
SCUBE3
Signal peptide, CUB and EGF-like domain-containing protein 3 isoform X1.
  
  
 
0.830
GCC2
GRIP and coiled-coil domain-containing protein 2.
    
 0.758
MPDZ
Multiple PDZ domain protein isoform X1.
   
 
 0.665
CDON
Cell adhesion molecule-related/down-regulated by oncogenes.
    
 0.643
SIAH1
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
      
 0.521
LOC101383287
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
      
 0.521
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.520
MMP9
Matrix metalloproteinase-9.
   
 0.507
KLRG2
Killer cell lectin-like receptor subfamily G member 2.
    
 0.486
EHMT1
Histone-lysine N-methyltransferase EHMT1.
    
 0.478
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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