STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF20Transcription factor 20 isoform X1. (1956 aa)    
Predicted Functional Partners:
TNRC6C
Trinucleotide repeat-containing gene 6C protein isoform X1.
  
 0.747
BTAF1
TATA-binding protein-associated factor 172.
   
 
 0.668
UBTF
Nucleolar transcription factor 1 isoform X1.
   
 0.655
ARHGAP21
Rho GTPase-activating protein 21.
   
  
 0.629
ASH2L
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.620
RBBP5
Retinoblastoma-binding protein 5 isoform X1.
   
 0.579
EED
Polycomb protein EED isoform X1.
   
 0.566
SUZ12
Polycomb protein SUZ12.
   
 0.546
KAT6A
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.543
DMAP1
DNA methyltransferase 1-associated protein 1 isoform X1.
   
  
 0.543
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.