STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSM3Small G protein signaling modulator 3 isoform X1. (751 aa)    
Predicted Functional Partners:
ZMYM4
Zinc finger MYM-type protein 4 isoform X1.
     
 0.848
OTUD3
OTU domain-containing protein 3.
      
 0.811
UFSP2
Ufm1-specific protease 2.
      
 0.805
NUBPL
Iron-sulfur protein NUBPL.
      
 0.804
ZNF746
Zinc finger protein 746 isoform X1.
      
 0.764
DENND5B
DENN domain-containing protein 5B isoform X1.
      
 0.693
TMBIM4
Protein lifeguard 4 isoform X1; Belongs to the BI1 family.
      
 0.665
PELO
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
   
  
 0.661
LOC101383358
Nuclear body protein SP140-like protein.
      
 0.618
YWHAQ
14-3-3 protein theta; Belongs to the 14-3-3 family.
      
 0.581
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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