STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GKN1Gastrokine-1. (185 aa)    
Predicted Functional Partners:
LOC101386093
Protein CCSMST1.
      
 0.764
GKN2
Gastrokine-2.
  
  
0.658
TSC22D2
TSC22 domain family protein 2 isoform X1.
      
 0.655
ATP4A
Sodium/potassium-transporting ATPase subunit alpha.
   
  
 0.561
VSIG1
V-set and immunoglobulin domain-containing protein 1.
   
  
 0.542
ATP4B
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
   
  
 0.539
CHGA
chromogranin-A isoform X1.
      
 0.522
HFE
Hereditary hemochromatosis protein isoform X1; Belongs to the MHC class I family.
      
 0.522
TFF2
Trefoil factor 2.
   
  
 0.507
LGALS4
Galectin.
   
  
 0.486
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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