STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF14RBR-type E3 ubiquitin transferase. (474 aa)    
Predicted Functional Partners:
RNF216
E3 ubiquitin-protein ligase RNF216 isoform X1.
     
 0.739
AR
Androgen receptor.
    
 
 0.713
KPNB1
Importin subunit beta-1 isoform X1.
      
 0.596
ARHGAP27
LOW QUALITY PROTEIN: rho GTPase-activating protein 27.
    
 
 0.560
LOC101383467
Eukaryotic peptide chain release factor GTP-binding subunit ERF3B.
   
 
 0.553
HIPK2
Homeodomain-interacting protein kinase 2 isoform X1.
      
 0.524
NDUFA6
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 isoform X1; Belongs to the complex I LYR family.
      
 0.522
NDFIP1
NEDD4 family-interacting protein 1 isoform X1.
      
 0.522
SFXN2
Sidoreflexin.
      
 0.522
PRRC2A
Protein PRRC2A.
      
 0.480
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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