STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEND3BEN domain-containing protein 3. (828 aa)    
Predicted Functional Partners:
ERCC6L
DNA excision repair protein ERCC-6-like.
   
 
 0.733
SEC63
Translocation protein SEC63 homolog isoform X1.
      
 0.601
RTN4IP1
Reticulon-4-interacting protein 1, mitochondrial isoform X1.
      
 0.593
CLDN5
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.528
SCML4
Sex comb on midleg-like protein 4 isoform X1.
      
 0.528
ERCC6L2
DNA excision repair protein ERCC-6-like 2.
   
 
 0.528
ABCB6
ATP-binding cassette sub-family B member 6, mitochondrial.
      
 0.526
NACC1
Nucleus accumbens-associated protein 1 isoform X1.
    
 
 0.523
QRSL1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
      
 0.514
OSTM1
Osteopetrosis-associated transmembrane protein 1.
      
 0.514
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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