STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR54WD repeat-containing protein 54. (334 aa)    
Predicted Functional Partners:
CD99L2
CD99 antigen-like protein 2.
      
 0.727
ZCRB1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1.
      
 0.601
ZZEF1
Zinc finger ZZ-type and EF-hand domain-containing protein 1.
      
 0.529
ITPRIPL1
Inositol 1,4,5-trisphosphate receptor-interacting protein-like 1.
      
 0.528
SPCS2
Signal peptidase complex subunit 2.
      
 0.523
DUS3L
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
      
 0.523
WDR66
WD repeat-containing protein 66.
      
 0.523
FBXL17
F-box/LRR-repeat protein 17.
      
 0.522
ZFAND2A
AN1-type zinc finger protein 2A.
      
 0.522
ZNHIT3
Zinc finger HIT domain-containing protein 3 isoform X1.
      
 0.522
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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