STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL5339S ribosomal protein L53, mitochondrial. (112 aa)    
Predicted Functional Partners:
MRPL50
39S ribosomal protein L50, mitochondrial.
   
 
 0.909
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.898
MRPL10
39S ribosomal protein L10, mitochondrial.
   
 
 0.877
MRPL4
39S ribosomal protein L4, mitochondrial.
   
 
 0.877
MRPL11
39S ribosomal protein L11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.871
MRPL47
39S ribosomal protein L47, mitochondrial isoform X1.
    
 
 0.870
LOC101370882
39S ribosomal protein L1, mitochondrial-like.
    
 
 0.865
MRPL21
39S ribosomal protein L21, mitochondrial.
   
 
 0.848
GADD45GIP1
Growth arrest and DNA damage-inducible proteins-interacting protein 1.
    
 
 0.846
MRPL51
39S ribosomal protein L51, mitochondrial.
    
 
 0.846
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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