STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101373803Suppressor of SWI4 1 homolog isoform X1; Belongs to the G-protein coupled receptor 1 family. (786 aa)    
Predicted Functional Partners:
RRP15
RRP15-like protein.
   
 
 0.930
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
   0.924
SURF6
Surfeit locus protein 6.
   
 
 0.915
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.909
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 
 0.902
RPF1
Ribosome production factor 1.
   
 
 0.898
DDX27
Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family.
   
   0.896
NOC2L
Nucleolar complex protein 2 homolog.
   
 
 0.893
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 
 0.889
DDX56
Probable ATP-dependent RNA helicase DDX56 isoform X1.
   
   0.882
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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