STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX1MHC class II regulatory factor RFX1. (969 aa)    
Predicted Functional Partners:
ATR
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 
 0.739
RFXAP
Regulatory factor X-associated protein.
    
 
 0.599
CHEK2
Serine/threonine-protein kinase Chk2 isoform X1.
   
 
 0.569
RFX7
DNA-binding protein RFX7.
    
 
0.568
BCAP31
B-cell receptor-associated protein 31.
      
 0.555
NFIC
Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.
    
 
 0.550
RFXANK
DNA-binding protein RFXANK isoform X1.
   
 
 0.541
ZSCAN20
Zinc finger and SCAN domain-containing protein 20.
    
 
 0.529
SGSM1
Small G protein signaling modulator 1 isoform X1.
      
 0.527
KIAA0319
Dyslexia-associated protein KIAA0319 homolog isoform X1.
    
 
 0.525
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.