STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC2HC1CZinc finger C2HC domain-containing protein 1C. (529 aa)    
Predicted Functional Partners:
RBM25
RNA-binding protein 25.
   
 
 0.764
CDC5L
Cell division cycle 5-like protein isoform X1.
   
 
 0.732
MLH3
DNA mismatch repair protein Mlh3.
      
 0.729
RPS6KL1
Ribosomal protein S6 kinase-like 1.
      
 0.718
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.673
SF3B2
Splicing factor 3B subunit 2 isoform X1.
   
 
 0.650
SF3B3
Splicing factor 3B subunit 3.
    
 
 0.643
SNRNP35
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 
 0.636
SNRNP70
U1 small nuclear ribonucleoprotein 70 kDa isoform X1.
   
 
 0.636
PRPF39
pre-mRNA-processing factor 39 isoform X1.
    
 
 0.630
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.