STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101368708Histone-lysine N-methyltransferase SETMAR. (301 aa)    
Predicted Functional Partners:
CDYL2
Chromodomain Y-like protein 2.
   
 0.754
LOC101378816
Chromodomain Y-like protein.
   
 0.754
LOC101368883
Chromodomain Y-like protein.
   
 0.754
CENPB
Major centromere autoantigen B.
   
 
 0.703
TIGD5
Tigger transposable element-derived protein 5.
   
 
 0.680
TIGD7
Tigger transposable element-derived protein 7.
   
 
 0.678
LOC101373073
Calmodulin-lysine N-methyltransferase-like.
     
 0.662
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.625
PGBD5
piggyBac transposable element-derived protein 5.
    
 
 0.622
EOGT
EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1.
      
 0.619
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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