STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC176Basal body-orientation factor 1. (531 aa)    
Predicted Functional Partners:
IQSEC2
IQ motif and SEC7 domain-containing protein 2 isoform X1.
      
 0.705
CEP135
Centrosomal protein of 135 kDa.
    
 
 0.649
RPS6KA6
Ribosomal protein S6 kinase.
      
 0.616
FBXO36
F-box only protein 36.
      
 0.606
VPS13A
Vacuolar protein sorting-associated protein 13A isoform X1.
   
  
 0.529
GPR160
Probable G-protein coupled receptor 160.
      
 0.522
LOC101377509
LOW QUALITY PROTEIN: probable G-protein coupled receptor 160.
      
 0.522
LOC101374670
Centrin-2.
   
 0.520
CETN2
Centrin-2.
   
 0.520
MYO1F
Unconventional myosin-If; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.480
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.