STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETDB2Histone-lysine N-methyltransferase SETDB2 isoform X1. (716 aa)    
Predicted Functional Partners:
ARL14EP
ARL14 effector protein.
    
 
 0.939
PHF11
PHD finger protein 11.
 
 
  
 0.857
LOC105757891
PHD finger protein 11-like.
 
 
  
 0.857
ATF7IP
Activating transcription factor 7-interacting protein 1 isoform X1.
   
 0.855
ATF7IP2
Activating transcription factor 7-interacting protein 2.
   
 0.814
LOC101373073
Calmodulin-lysine N-methyltransferase-like.
     
 0.682
LOC101383856
Lysine-specific demethylase 6A isoform X1.
   
 0.680
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
    
  0.663
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
  0.663
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
  0.663
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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