STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF408Zinc finger protein 408. (716 aa)    
Predicted Functional Partners:
GPATCH3
G patch domain-containing protein 3.
   
    0.895
TSPAN12
Tetraspanin.
      
 0.715
NDP
Norrin.
    
 
 0.713
GRAMD4
GRAM domain-containing protein 4.
    
 0.642
LGR4
Leucine-rich repeat-containing G-protein coupled receptor 4 isoform X1.
    
 0.639
CCNJ
cyclin-J isoform X1; Belongs to the cyclin family.
   
 0.639
GP9
Platelet glycoprotein IX.
    
 0.629
LRP5
Low-density lipoprotein receptor-related protein 5.
    
 0.628
ACOT13
Acyl-coenzyme A thioesterase 13.
      
 0.623
LOC101377577
BTB/POZ domain-containing protein 9.
      
 0.623
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.