STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEZ6Seizure protein 6 homolog isoform X1. (987 aa)    
Predicted Functional Partners:
PHF12
PHD finger protein 12 isoform X1.
 
  
 
 0.742
MPDZ
Multiple PDZ domain protein isoform X1.
    
 0.742
SDF2
Stromal cell-derived factor 2 isoform X1.
    
 
 0.729
WSCD1
WSC domain-containing protein 1.
   
 
 0.627
KARS
Lysine--tRNA ligase.
    
 
 0.622
FAM159A
Membrane protein FAM159A isoform X1.
      
 0.617
TBC1D32
Protein broad-minded isoform X1.
      
 0.615
GALNT18
Polypeptide N-acetylgalactosaminyltransferase.
   
 0.611
ICA1
Islet cell autoantigen 1 isoform X1.
      
 0.600
MPP7
MAGUK p55 subfamily member 7; Belongs to the MAGUK family.
   
 0.574
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.