STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMIGD1Transmembrane and immunoglobulin domain-containing protein 1. (261 aa)    
Predicted Functional Partners:
GUCA2A
Guanylin.
   
  
 0.670
BLMH
Bleomycin hydrolase; Belongs to the peptidase C1 family.
 
      0.586
PCNXL3
Pecanex-like protein 3.
      
 0.522
PKHD1
Fibrocystin.
      
 0.522
CLRN3
Clarin-3.
   
  
 0.465
CRYZL1
Quinone oxidoreductase-like protein 1 isoform X1.
      
 0.443
UTP18
U3 small nucleolar RNA-associated protein 18 homolog isoform X1.
      
 0.438
SNAPC1
snRNA-activating protein complex subunit 1.
      
 0.437
SLC13A3
Solute carrier family 13 member 3 isoform X1.
   
  
 0.407
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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