STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAHD2AFumarylacetoacetate hydrolase domain-containing protein 2A isoform X1. (342 aa)    
Predicted Functional Partners:
HINT2
LOW QUALITY PROTEIN: histidine triad nucleotide-binding protein 2, mitochondrial.
   
   0.903
HGD
Homogentisate 1,2-dioxygenase.
  
 
 0.783
ZNF576
Zinc finger protein 576 isoform X1.
      
 0.655
HSCB
Iron-sulfur cluster co-chaperone protein HscB, mitochondrial.
   
  
 0.624
ALDH7A1
Alpha-aminoadipic semialdehyde dehydrogenase isoform X1; Belongs to the aldehyde dehydrogenase family.
  
 0.614
VARS
valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.555
HMGCL
hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1.
  
 
 0.547
HMGCLL1
LOW QUALITY PROTEIN: 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic.
  
 
 0.547
BOLA3
bolA-like protein 3 isoform X1; Belongs to the BolA/IbaG family.
      
 0.523
CFAP20
Cilia- and flagella-associated protein 20 isoform X1.
      
 0.523
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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