STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNNPinin isoform X1. (753 aa)    
Predicted Functional Partners:
SAP18
Histone deacetylase complex subunit SAP18.
    
 0.997
RNPS1
RNA-binding protein with serine-rich domain 1 isoform X1.
   
 0.984
PNISR
Arginine/serine-rich protein PNISR isoform X1.
   
 
 0.931
ACIN1
Apoptotic chromatin condensation inducer in the nucleus isoform X1.
   
 0.921
LUC7L3
Luc7-like protein 3 isoform X1.
   
 
 0.899
EIF4A3
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.887
MAGOH
Protein mago nashi homolog.
   
 0.840
MAGOHB
Protein mago nashi homolog 2 isoform X1.
   
 0.840
PRPF4B
Serine/threonine-protein kinase PRP4 homolog.
   
 0.840
PABPN1
Polyadenylate-binding protein 2.
   
 0.816
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.