STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAP2LCytoskeleton-associated protein 2-like. (749 aa)    
Predicted Functional Partners:
CENPE
LOW QUALITY PROTEIN: centromere-associated protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.795
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.765
POLR2G
DNA-directed RNA polymerase II subunit RPB7.
   
 0.752
POLR2E
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.749
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
 0.749
POLR2K
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
 0.749
POLR2L
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.749
POLR2D
DNA-directed RNA polymerase II subunit RPB4.
    
 0.749
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.749
POLR2I
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.748
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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