STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101366960Tetratricopeptide repeat protein 28-like. (96 aa)    
Predicted Functional Partners:
LOC101365763
Tetratricopeptide repeat protein 28.
 
      0.900
IAH1
Isoamyl acetate-hydrolyzing esterase 1 homolog.
   
  
 0.837
F13B
Coagulation factor XIII B chain.
    
 
 0.763
LEO1
RNA polymerase-associated protein LEO1 isoform X1.
    
 0.723
LOC101366449
RNA polymerase-associated protein LEO1-like.
    
 0.723
LIX1L
LIX1-like protein.
      
 0.713
TRAP1
Heat shock protein 75 kDa, mitochondrial isoform X1.
  
 0.666
HSP90AB1
Heat shock protein HSP 90-beta isoform X1.
  
 0.666
HSP90AA1
LOW QUALITY PROTEIN: heat shock protein HSP 90-alpha.
  
 0.666
TSC1
Hamartin isoform X1.
  
 0.666
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.