STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHG7LOW QUALITY PROTEIN: pleckstrin homology domain-containing family G member 7. (404 aa)    
Predicted Functional Partners:
WDFY3
WD repeat and FYVE domain-containing protein 3.
    
 0.654
TNF
Tumor necrosis factor; Belongs to the tumor necrosis factor family.
    
 0.626
TRADD
Tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1.
    
 0.575
LTA
Lymphotoxin-alpha; Belongs to the tumor necrosis factor family.
    
 0.547
TNFSF15
Tumor necrosis factor ligand superfamily member 15.
    
 0.537
VPS4A
Vacuolar protein sorting-associated protein 4A isoform X1; Belongs to the AAA ATPase family.
    
 
 0.532
IKBKG
NF-kappa-B essential modulator isoform X1.
    
 0.513
ARHGEF33
Rho guanine nucleotide exchange factor 33 isoform X1.
    
 0.491
LOC101377771
LOW QUALITY PROTEIN: uncharacterized protein C12orf74 homolog.
 
      0.473
ARHGEF40
Rho guanine nucleotide exchange factor 40.
     
 0.467
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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