STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC4Tetratricopeptide repeat protein 4 isoform X1. (387 aa)    
Predicted Functional Partners:
HGH1
Protein HGH1 homolog.
   
 
 0.953
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
 
      0.810
LOC101374252
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
 
      0.810
LEO1
RNA polymerase-associated protein LEO1 isoform X1.
    
 0.723
LOC101366449
RNA polymerase-associated protein LEO1-like.
    
 0.723
TRAP1
Heat shock protein 75 kDa, mitochondrial isoform X1.
  
 0.683
HSP90AB1
Heat shock protein HSP 90-beta isoform X1.
  
 0.670
HSP90AA1
LOW QUALITY PROTEIN: heat shock protein HSP 90-alpha.
  
 0.670
TSC1
Hamartin isoform X1.
  
 0.670
LOC101381301
LOW QUALITY PROTEIN: heat shock protein HSP 90-alpha-like.
  
 0.670
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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