STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDCCAG8Serologically defined colon cancer antigen 8 isoform X1. (777 aa)    
Predicted Functional Partners:
PLK1
Serine/threonine-protein kinase PLK.
   
 0.834
CEP164
Centrosomal protein of 164 kDa.
   
 0.639
RABEP1
Rab GTPase-binding effector protein 1.
    
 
 0.548
PLK3
Serine/threonine-protein kinase PLK.
   
 0.544
PLK2
Serine/threonine-protein kinase PLK.
   
 0.544
PLK5
Serine/threonine-protein kinase PLK.
   
 0.544
OPTN
Optineurin isoform X1.
    
 0.534
AIMP2
Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 isoform X1.
    
 
 0.533
TTC8
Tetratricopeptide repeat protein 8 isoform X1.
    
 
 0.531
NPHP4
Nephrocystin-4.
    
 
 0.528
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.