LOC101378163 protein (Odobenus rosmarus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC101378163

Glutathione S-transferase theta-1-like isoform X1; Belongs to the GST superfamily. (240 aa)

Predicted Functional Partners:

EPRS

0.964

EPHX1

0.922

PRDX6

0.922

GSR

0.918

GSS

0.914

LOC101382250

0.912

GPX4

0.910

LOC101365364

0.906

LOC101365942

0.906

LOC101381962

0.906

Your Current Organism:

Odobenus rosmarus

NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EPHX1	LOC101365364	A0A2U3VFS7	A0A2U3VJG2	LOW QUALITY PROTEIN: epoxide hydrolase 1.	Cytochrome P450 2E1; Belongs to the cytochrome P450 family.	0.915
EPHX1	LOC101365942	A0A2U3VFS7	A0A2U3WM46	LOW QUALITY PROTEIN: epoxide hydrolase 1.	Cytochrome P450 1B1; Belongs to the cytochrome P450 family.	0.952
EPHX1	LOC101378163	A0A2U3VFS7	A0A2U3VYK2	LOW QUALITY PROTEIN: epoxide hydrolase 1.	Glutathione S-transferase theta-1-like isoform X1; Belongs to the GST superfamily.	0.922
EPHX1	LOC101381962	A0A2U3VFS7	A0A2U3ZNA9	LOW QUALITY PROTEIN: epoxide hydrolase 1.	Cytochrome P450 1A2 isoform X1; Belongs to the cytochrome P450 family.	0.952
EPHX1	LOC101382250	A0A2U3VFS7	A0A2U3WGK9	LOW QUALITY PROTEIN: epoxide hydrolase 1.	Cytochrome P450 1A1; Belongs to the cytochrome P450 family.	0.969
EPRS	LOC101378163	A0A2U3ZVT7	A0A2U3VYK2	Bifunctional glutamate/proline--tRNA ligase isoform X1.	Glutathione S-transferase theta-1-like isoform X1; Belongs to the GST superfamily.	0.964
GPX4	GSR	A0A2U3ZAS8	A0A2U3WHV1	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.909
GPX4	GSS	A0A2U3ZAS8	A0A2U3VF62	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	Glutathione synthetase.	0.923
GPX4	LOC101378163	A0A2U3ZAS8	A0A2U3VYK2	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	Glutathione S-transferase theta-1-like isoform X1; Belongs to the GST superfamily.	0.910
GPX4	PRDX6	A0A2U3ZAS8	A0A2U3WK92	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	Peroxiredoxin-6.	0.464
GSR	GPX4	A0A2U3WHV1	A0A2U3ZAS8	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	0.909
GSR	GSS	A0A2U3WHV1	A0A2U3VF62	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Glutathione synthetase.	0.944
GSR	LOC101378163	A0A2U3WHV1	A0A2U3VYK2	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Glutathione S-transferase theta-1-like isoform X1; Belongs to the GST superfamily.	0.918
GSR	PRDX6	A0A2U3WHV1	A0A2U3WK92	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	Peroxiredoxin-6.	0.515
GSS	GPX4	A0A2U3VF62	A0A2U3ZAS8	Glutathione synthetase.	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	0.923
GSS	GSR	A0A2U3VF62	A0A2U3WHV1	Glutathione synthetase.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.944
GSS	LOC101378163	A0A2U3VF62	A0A2U3VYK2	Glutathione synthetase.	Glutathione S-transferase theta-1-like isoform X1; Belongs to the GST superfamily.	0.914
GSS	PRDX6	A0A2U3VF62	A0A2U3WK92	Glutathione synthetase.	Peroxiredoxin-6.	0.910
LOC101365364	EPHX1	A0A2U3VJG2	A0A2U3VFS7	Cytochrome P450 2E1; Belongs to the cytochrome P450 family.	LOW QUALITY PROTEIN: epoxide hydrolase 1.	0.915
LOC101365364	LOC101378163	A0A2U3VJG2	A0A2U3VYK2	Cytochrome P450 2E1; Belongs to the cytochrome P450 family.	Glutathione S-transferase theta-1-like isoform X1; Belongs to the GST superfamily.	0.906