STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSUN45-methylcytosine rRNA methyltransferase NSUN4 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (384 aa)    
Predicted Functional Partners:
MTERF4
Transcription termination factor 4, mitochondrial.
    
 0.995
FTSJ2
rRNA methyltransferase 2, mitochondrial.
  
 
 0.875
MALSU1
Mitochondrial assembly of ribosomal large subunit protein 1.
  
 
 0.848
MTG1
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
 
 0.839
NOC2L
Nucleolar complex protein 2 homolog.
   
 
 0.828
BRIX1
Ribosome biogenesis protein BRX1 homolog.
   
 
 0.806
NSUN5
Probable 28S rRNA (Cytosine-C(5))-methyltransferase isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.792
MTG2
Mitochondrial ribosome-associated GTPase 2.
   
 
 0.785
GTPBP4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.785
MTFMT
LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase, mitochondrial.
  
  
 0.784
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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