STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC52A2Solute carrier family 52, riboflavin transporter, member 2. (445 aa)    
Predicted Functional Partners:
SLC22A11
Solute carrier family 22 member 11.
      
 0.705
SIAH3
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
      
 0.662
SLC9C2
Sodium/hydrogen exchanger 11.
      
 0.625
SLC7A13
LOW QUALITY PROTEIN: solute carrier family 7 member 13.
    
 
 0.623
TCTN2
Tectonic-2.
      
 0.619
RTTN
Rotatin.
      
 0.617
SLC7A3
Cationic amino acid transporter 3.
    
 
 0.527
LOC101368743
Cationic amino acid transporter 3-like.
    
 
 0.527
SLC25A18
Mitochondrial glutamate carrier 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.522
INPP5K
Inositol polyphosphate 5-phosphatase K.
      
 0.521
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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