STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101377680Sphingomyelin phosphodiesterase 3. (474 aa)    
Predicted Functional Partners:
ARHGAP39
Rho GTPase-activating protein 39.
      
 0.523
SOGA3
Protein SOGA3.
      
 0.523
GRINA
Protein lifeguard 1.
      
 0.522
ADGRF1
Probable G-protein coupled receptor 110 isoform X1; Belongs to the G-protein coupled receptor 2 family.
      
 0.451
CYHR1
Cysteine and histidine-rich protein 1 isoform X1.
      
 0.450
SUPT3H
Transcription initiation protein SPT3 homolog.
      
 0.450
TSPAN11
Tetraspanin.
      
 0.437
DNMBP
Dynamin-binding protein.
      
 0.435
MOCS1
Molybdenum cofactor biosynthesis protein 1 isoform X1.
      
 0.435
ATF7
Cyclic AMP-dependent transcription factor ATF-7 isoform X1.
      
 0.434
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.