STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMBIM6Bax inhibitor 1; Belongs to the BI1 family. (237 aa)    
Predicted Functional Partners:
DESI1
Desumoylating isopeptidase 1.
    
   0.897
LOC101371713
ATPase family AAA domain-containing protein 3.
      
 0.721
CCAR2
Cell cycle and apoptosis regulator protein 2 isoform X1.
      
 0.712
LOC101381516
UPF0669 protein C6orf120 homolog.
      
 0.699
GHITM
Growth hormone-inducible transmembrane protein; Belongs to the BI1 family.
   
  
 0.657
CPNE5
Copine-5.
      
 0.638
TMUB1
Transmembrane and ubiquitin-like domain-containing protein 1.
   
  
 0.620
LARP4
La-related protein 4.
      
 0.616
RTN4
Reticulon.
   
  
 0.599
PSEN2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.592
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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