STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNP1Spermatid nuclear transition protein 1. (55 aa)    
Predicted Functional Partners:
TNP2
Nuclear transition protein 2.
   
  
 0.814
SPEM1
Spermatid maturation protein 1.
      
 0.765
MTL5
Tesmin.
      
 0.762
PRM3
Protamine-3.
   
  
 0.750
STRA8
Stimulated by retinoic acid gene 8 protein homolog.
      
 0.721
LOC101363888
Acrosin-like; Belongs to the peptidase S1 family.
   
  
 0.671
ACR
Acrosin; Belongs to the peptidase S1 family.
   
  
 0.671
FAM170B
Uncharacterized protein.
      
 0.616
UCHL1
Ubiquitin carboxyl-terminal hydrolase.
      
 0.615
FAM170A
Protein FAM170A.
   
  
 0.614
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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